Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1783120 bp
Thymine Count
1789582 bp
Guanine Count
1450376 bp
Cytosine Count
1449784 bp
Genome Length
6480316 bp
Protein-coding Genes
5579 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyltransferase | DCM71_00470 | Not Available | Negative | 107074 - 107571 | 18403.3 |
| duf4783 domain-containing protein | DCM71_00475 | Not Available | Positive | 107671 - 108090 | 16025.5 |
| hypothetical protein | DCM71_00480 | Not Available | Negative | 108093 - 108947 | 29751.5 |
| 1-aminocyclopropane-1-carboxylate deaminase | DCM71_00485 | Not Available | Positive | 109027 - 109941 | 33668.7 |
| pyrroloquinoline quinone biosynthesis protein pqqb | DCM71_00495 | Not Available | Negative | 110686 - 111594 | 34560.6 |
| gdsl family lipase | DCM71_00500 | Not Available | Positive | 111838 - 112573 | 27221.6 |
| duf3995 domain-containing protein | DCM71_00505 | Not Available | Positive | 112574 - 112989 | 15325.3 |
| transporter | DCM71_00510 | Not Available | Positive | 113102 - 114469 | 51320.6 |
| efflux rnd transporter periplasmic adaptor subunit | DCM71_00515 | Not Available | Positive | 114512 - 115552 | 37626.3 |
| multidrug transporter acrb | DCM71_00520 | Not Available | Positive | 115598 - 118675 | 113814.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
