MAG TPA_asm: Treponema sp.

Gram-negativeSpirillaMotileAnaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

MAG TPA_asm: Treponema sp. is a Gram-negative, anaerobic bacterium characterized by its spirilla-shaped morphology and filamentous cell arrangement. This organism is classified as a chemoheterotroph, indicating that it derives its energy from organic compounds, rather than photosynthesis or inorganic sources. Treponema sp. is motile, possessing flagella that facilitate its movement in various environments. Multiple habitats have been reported for this species, suggesting a versatile ecological adaptability. Importantly, Treponema sp. is nonsporulating, which implies that it does not form spores as a means of survival under adverse conditions. Instead, it relies on its motility and anaerobic metabolism to thrive in environments where oxygen is limited. This bacterium has been identified as a host-associated organism, with Homo sapiens being one of its known hosts. This association may indicate a role in human microbiota, which could have implications for human health, although specific interactions or effects are not detailed in the provided information. The presence of a single replicon in its genome suggests a streamlined genetic architecture, which may be advantageous for its adaptation to various anaerobic environments. Overall, the traits of MAG TPA_asm: Treponema sp. highlight its potential ecological roles and interactions within diverse microbial communities, particularly in anaerobic conditions.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of MAG TPA_asm: Treponema sp.
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementFilaments
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Treponema sp. isolate UBA12315 contig_4052, whole

Gene Summary

Adenine Count

825409 bp

Thymine Count

823241 bp

Guanine Count

835800 bp

Cytosine Count

836990 bp

Genome Length

3446493 bp

Protein-coding Genes

3414 genes

Non-Coding Genes

35 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDCL73_00005Not AvailablePositive1 - 29110505.8
5s ribosomal rnaNot AvailableNot AvailablePositive407 - 517Not Available
glycosyl hydrolaseDCL73_00010Not AvailableNegative423 - 253776463.0
hypothetical proteinDCL73_00015Not AvailablePositive2686 - 28777592.47
dna-binding response regulatorDCL73_00020Not AvailablePositive2880 - 356024859.2
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive4004 - 4414Not Available
hypothetical proteinDCL73_00025Not AvailableNegative3589 - 572179975.4
alpha-xylosidaseDCL73_00030Not AvailableNegative5809 - 816087841.5
sugar abc transporter permeaseDCL73_00035Not AvailableNegative8177 - 901331287.9
abc transporter permeaseDCL73_00040Not AvailableNegative9010 - 990933586.7

Displaying genes 1 – 10 of 3449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.