MAG TPA_asm: Brevundimonas sp.

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Brevundimonas

Description

Brevundimonas sp. is characterized by its rod-shaped morphology and possesses two replicons, indicating a specific genomic structure that may contribute to its adaptability and potential metabolic diversity. The organism is documented under the accessions DMFA00000000.1 and DNUY00000000.1, which provide a basis for further genomic studies and comparative analyses within the Brevundimonas genus. Brevundimonas species are known to inhabit various environments, including soil and water, and are often associated with bioremediation processes due to their ability to degrade pollutants. The presence of two replicons may suggest a complex regulatory mechanism for gene expression and replication, which could play a role in the organism's resilience in fluctuating environmental conditions. From an ecological perspective, the adaptability of Brevundimonas sp. could be significant in its ecological niches, allowing it to thrive in diverse habitats and contribute to nutrient cycling. This adaptability may also position Brevundimonas sp. as a candidate for biotechnological applications, particularly in the fields of environmental microbiology and bioremediation strategies aimed at pollutant degradation. Understanding the genomic features associated with this organism can provide insights into its ecological roles and potential benefits in natural and engineered ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusBrevundimonas
SpeciesBrevundimonas sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcrude oil; groundwater
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Brevundimonas sp. isolate UBA8112 contig_32, whole

Gene Summary

Adenine Count

502443 bp

Thymine Count

499932 bp

Guanine Count

1012269 bp

Cytosine Count

1015496 bp

Genome Length

3077419 bp

Protein-coding Genes

3254 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseDDY79_03305Not AvailableNegative593987 - 59514140220.9
trna dihydrouridine synthase dusbDDY79_03310Not AvailablePositive595219 - 59629238394.7
pas domain-containing sensor histidine kinaseDDY79_03315Not AvailablePositive596289 - 59855980787.5
sigma-54-dependent fis family transcriptional regulatorDDY79_03320Not AvailablePositive598569 - 59997551179.3
d-amino acid aminotransferaseDDY79_03325Not AvailablePositive599975 - 60083531230.6
rna chaperone hfqDDY79_03330Not AvailablePositive600939 - 6011849299.18
gtpase hflxDDY79_03335Not AvailablePositive601185 - 60249848651.1
na+/h+ antiporterDDY79_03340Not AvailablePositive602505 - 60382247125.4
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseDDY79_03345Not AvailablePositive603847 - 6039664443.31
glycerol-3-phosphataseDDY79_03365Not AvailablePositive605699 - 60635823161.6

Displaying genes 651 – 660 of 6630 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
SepticemiaCausesPMC10269605
Pneumonia/pleuritisCausesPMC10269605
EndocarditisCausesPMC10269605
MeningitisCausesPMC10269605
KeratitisCausesPMC10269605
Urinary tract infectionsCausesPMC10269605

Displaying health effects 1 – 6 of 6 in total