MAG TPA_asm: Rhodobiaceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhodobiaceae

Genus

Description

The MAG TPA_asm represents a bacterium belonging to the family Rhodobiaceae. It is characterized by having a single replicon, which indicates a streamlined genomic structure typical of some bacterial species. The genomic data for this organism can be found under the accession number DLXY00000000.1. Bacteria in the Rhodobiaceae family are often recognized for their roles in various ecological contexts, particularly in the cycling of nutrients and the degradation of organic matter. While specific traits such as metabolic pathways, morphology, or ecological niches of the Rhodobiaceae bacterium represented by MAG TPA_asm are not detailed, members of this family often engage in interactions that contribute to soil health and ecosystem functioning. The presence of a single replicon may suggest that this bacterium has adapted to a specific ecological niche, potentially allowing for efficient replication and survival in its environment. Overall, the characteristics of MAG TPA_asm highlight its potential role within microbial communities, although further research would be needed to elucidate its specific functions and interactions within its ecological framework.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Rhodobiaceae bacterium isolate UBA12304 contig_1270,

Gene Summary

Adenine Count

637837 bp

Thymine Count

635659 bp

Guanine Count

1051764 bp

Cytosine Count

1053891 bp

Genome Length

3516516 bp

Protein-coding Genes

3816 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal abc transporter permeaseDCF73_01875Not AvailableNegative333605 - 33553971450.4
peptidoglycan-binding protein lysmDCF73_01880Not AvailableNegative335705 - 33606713177.4
peptidoglycan-binding protein lysmDCF73_01885Not AvailableNegative336276 - 33681418513.9
tigr00730 family rossman fold proteinDCF73_01890Not AvailablePositive336963 - 33751119856.3
eama family transporter rardDCF73_01895Not AvailableNegative337576 - 33851434143.4
aminoglycoside phosphotransferaseDCF73_01900Not AvailableNegative338678 - 3388034497.34
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeDCF73_01905Not AvailableNegative339011 - 33948817198.5
pyridine nucleotide-disulfide oxidoreductaseDCF73_01910Not AvailablePositive339727 - 34019317356.7
pyridine nucleotide-disulfide oxidoreductaseDCF73_01915Not AvailablePositive340362 - 34111427138.2
2fe-2s ferredoxinDCF73_01920Not AvailablePositive341164 - 3413135080.98

Displaying genes 391 – 400 of 3865 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.