MAG TPA_asm: Rhodobiaceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhodobiaceae

Genus

Description

The MAG TPA_asm represents a bacterium belonging to the family Rhodobiaceae. It is characterized by having a single replicon, which indicates a streamlined genomic structure typical of some bacterial species. The genomic data for this organism can be found under the accession number DLXY00000000.1. Bacteria in the Rhodobiaceae family are often recognized for their roles in various ecological contexts, particularly in the cycling of nutrients and the degradation of organic matter. While specific traits such as metabolic pathways, morphology, or ecological niches of the Rhodobiaceae bacterium represented by MAG TPA_asm are not detailed, members of this family often engage in interactions that contribute to soil health and ecosystem functioning. The presence of a single replicon may suggest that this bacterium has adapted to a specific ecological niche, potentially allowing for efficient replication and survival in its environment. Overall, the characteristics of MAG TPA_asm highlight its potential role within microbial communities, although further research would be needed to elucidate its specific functions and interactions within its ecological framework.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Rhodobiaceae bacterium isolate UBA12304 contig_1270,

Gene Summary

Adenine Count

637837 bp

Thymine Count

635659 bp

Guanine Count

1051764 bp

Cytosine Count

1053891 bp

Genome Length

3516516 bp

Protein-coding Genes

3816 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter substrate-binding proteinDCF73_17670Not AvailablePositive3155142 - 315635343726.6
branched-chain amino acid abc transporter permeaseDCF73_17675Not AvailablePositive3156280 - 315726934952.6
branched-chain amino acid abc transporter permeaseDCF73_17680Not AvailablePositive3157266 - 315822834410.8
abc transporter atp-binding proteinDCF73_17685Not AvailablePositive3158225 - 315896826777.6
phosphoribosylglycinamide formyltransferaseDCF73_17690Not AvailableNegative3159011 - 315955319462.7
phosphoribosylformylglycinamidine cyclo-ligaseDCF73_17695Not AvailableNegative3159550 - 316064137802.4
hypothetical proteinDCF73_17700Not AvailablePositive3160824 - 316200241655.9
ai-2e family transporterDCF73_17705Not AvailablePositive3162033 - 316313039015.1
chromosomal replication initiator dnaaDCF73_17710Not AvailablePositive3163133 - 316379823753.7
rna degradosome polyphosphate kinaseDCF73_17715Not AvailablePositive3163899 - 316610682290.0

Displaying genes 3491 – 3500 of 3865 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.