MAG TPA_asm: Rhodobiaceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhodobiaceae

Genus

Description

The MAG TPA_asm represents a bacterium belonging to the family Rhodobiaceae. It is characterized by having a single replicon, which indicates a streamlined genomic structure typical of some bacterial species. The genomic data for this organism can be found under the accession number DLXY00000000.1. Bacteria in the Rhodobiaceae family are often recognized for their roles in various ecological contexts, particularly in the cycling of nutrients and the degradation of organic matter. While specific traits such as metabolic pathways, morphology, or ecological niches of the Rhodobiaceae bacterium represented by MAG TPA_asm are not detailed, members of this family often engage in interactions that contribute to soil health and ecosystem functioning. The presence of a single replicon may suggest that this bacterium has adapted to a specific ecological niche, potentially allowing for efficient replication and survival in its environment. Overall, the characteristics of MAG TPA_asm highlight its potential role within microbial communities, although further research would be needed to elucidate its specific functions and interactions within its ecological framework.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Rhodobiaceae bacterium isolate UBA12304 contig_1270,

Gene Summary

Adenine Count

637837 bp

Thymine Count

635659 bp

Guanine Count

1051764 bp

Cytosine Count

1053891 bp

Genome Length

3516516 bp

Protein-coding Genes

3816 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transketolaseDCF73_16705Not AvailableNegative2974809 - 297686373401.3
hypothetical proteinDCF73_16710Not AvailablePositive2977015 - 297744015505.2
cell division protein zapaDCF73_16715Not AvailablePositive2977467 - 297782613058.3
5-formyltetrahydrofolate cyclo-ligaseDCF73_16725Not AvailablePositive2978065 - 297866421302.4
metallophosphoesteraseDCF73_16730Not AvailablePositive2978669 - 297948128585.3
hypothetical proteinDCF73_16735Not AvailablePositive2979487 - 297999218925.7
glycosyltransferase family 1 proteinDCF73_16740Not AvailablePositive2980309 - 298076417670.6
yebc/pmpr family dna-binding transcriptional regulatorDCF73_16745Not AvailablePositive2981116 - 298186227066.8
crossover junction endodeoxyribonuclease ruvcDCF73_16750Not AvailablePositive2981957 - 298247817485.2
holliday junction branch migration protein ruvaDCF73_16755Not AvailablePositive2982475 - 298309221225.7

Displaying genes 3301 – 3310 of 3865 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.