Planktothrix rubescens strain PCC 7821

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Microcoleaceae

Genus

Planktothrix

Description

Planktothrix rubescens strain PCC 7821 is a cyanobacterium primarily found in various prealpine lakes, including Lake Bourget and Lake Constance. This organism is characterized by having a single replicon, which contributes to its genomic stability and adaptability within its aquatic habitat. The strain is indexed under the accession number CZCZ00000000.2, allowing for its genetic and functional analysis within the scientific community. Planktothrix rubescens is noted for its ability to thrive in freshwater environments, often contributing to the biomass in these ecosystems. Ecologically, Planktothrix rubescens plays a significant role in nutrient cycling and primary production within its habitats. Its presence can influence the overall productivity of the aquatic ecosystem, as it is capable of photosynthesis and can fix nitrogen. This capability allows it to contribute to the nutrient dynamics, especially in nutrient-limited conditions, potentially affecting the growth of other aquatic organisms. Understanding the specific traits and ecological roles of Planktothrix rubescens strain PCC 7821 enhances our knowledge of the biodiversity and functional dynamics in freshwater ecosystems, highlighting the importance of cyanobacteria in maintaining ecological balance and supporting aquatic life.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderOscillatoriales
FamilyMicrocoleaceae
GenusPlanktothrix
SpeciesPlanktothrix rubescens
Strainstrain PCC 7821

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Planktothrix rubescens strain PCC 7821
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatLake Bourget; Lake Constance; prealpine lakes
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planktothrix rubescens strain PCC 7821 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5254 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chat domain proteinPLAN_70055Not AvailableNegative4996587 - 499808955936.7
sec-independent protein translocase protein tatc (modular protein)PLAN_70056Not AvailablePositive4998289 - 499926035317.9
conserved hypothetical proteinPLAN_70057Not AvailableNegative4999327 - 500069151954.5
putative enzymePLAN_70058Not AvailablePositive5001045 - 500192630876.5
conserved hypothetical proteinPLAN_70059Not AvailableNegative5002032 - 500244515379.8
hypothetical proteinPLAN_70060Not AvailablePositive5002575 - 50027275528.81
Trna-glnNot AvailableNot AvailablePositive5002636 - 5002707Not Available
pspa/im30 family proteinPLAN_70061Not AvailableNegative5002946 - 500362326278.3
periplasmic sensor diguanylate cyclase/phosphodiesterase (fragment)PLAN_70062Not AvailableNegative5003660 - 500557972976.3
dna mismatch repair protein mutsPLAN_70063Not AvailablePositive5005721 - 500838499533.6

Displaying genes 4731 – 4740 of 5301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.