Planktothrix rubescens strain PCC 7821

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Microcoleaceae

Genus

Planktothrix

Description

Planktothrix rubescens strain PCC 7821 is a cyanobacterium primarily found in various prealpine lakes, including Lake Bourget and Lake Constance. This organism is characterized by having a single replicon, which contributes to its genomic stability and adaptability within its aquatic habitat. The strain is indexed under the accession number CZCZ00000000.2, allowing for its genetic and functional analysis within the scientific community. Planktothrix rubescens is noted for its ability to thrive in freshwater environments, often contributing to the biomass in these ecosystems. Ecologically, Planktothrix rubescens plays a significant role in nutrient cycling and primary production within its habitats. Its presence can influence the overall productivity of the aquatic ecosystem, as it is capable of photosynthesis and can fix nitrogen. This capability allows it to contribute to the nutrient dynamics, especially in nutrient-limited conditions, potentially affecting the growth of other aquatic organisms. Understanding the specific traits and ecological roles of Planktothrix rubescens strain PCC 7821 enhances our knowledge of the biodiversity and functional dynamics in freshwater ecosystems, highlighting the importance of cyanobacteria in maintaining ecological balance and supporting aquatic life.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderOscillatoriales
FamilyMicrocoleaceae
GenusPlanktothrix
SpeciesPlanktothrix rubescens
Strainstrain PCC 7821

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Planktothrix rubescens strain PCC 7821
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatLake Bourget; Lake Constance; prealpine lakes
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planktothrix rubescens strain PCC 7821 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5254 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conserved hypothetical proteinPLAN_160046Not AvailableNegative1863259 - 186412533229.8
glycosyl transferases group 1 family proteinPLAN_160047Not AvailableNegative1864225 - 186592866061.4
glycosyl transferase, family 2 (fragment)PLAN_160048Not AvailablePositive1866036 - 1868630101045.0
ppic-type ppiase domain proteinPLAN_160049Not AvailablePositive1868891 - 186964328231.0
toxin secretion abc transporter atp-binding proteinPLAN_160050Not AvailablePositive1869640 - 1872654109886.0
chromosome segregation atpase-like proteinPLAN_160051Not AvailablePositive1872707 - 187458170943.1
conserved membrane hypothetical proteinPLAN_160052Not AvailablePositive1874640 - 187651471164.9
dtdp-4-deoxyrhamnose-3,5-epimerasePLAN_160053Not AvailablePositive1876589 - 187713720685.6
dtdp-4-dehydrorhamnose reductase subunit, nad(p)-binding, of dtdp-l-rhamnose synthasePLAN_160054Not AvailablePositive1877134 - 187800932079.7
glucose-1-phosphate thymidylyltransferasePLAN_160055Not AvailablePositive1878061 - 187913438794.2

Displaying genes 1811 – 1820 of 5301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.