[Ruminococcus] torques strain 2789STDY5834841

Gram-positiveCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Mediterraneibacter

Description

[Ruminococcus] torques strain 2789STDY5834841 is a Gram-positive, anaerobic bacterium characterized by its cocci shape. This strain has been identified in the gut environment, specifically associated with the host Gallus gallus (domestic chicken). Notably, it possesses flagella, which may play a role in its motility within the gastrointestinal tract. The strain is categorized under a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and survival in the anaerobic conditions of the gut. The unique ecological niche occupied by [Ruminococcus] torques suggests its potential involvement in the complex microbial community that contributes to digestion and nutrient absorption in its avian host. Given its habitat and characteristics, [Ruminococcus] torques strain 2789STDY5834841 likely participates in various metabolic processes within the gut microbiome. Its presence may influence the overall health of Gallus gallus by aiding in the breakdown of complex carbohydrates and contributing to the fermentation processes that are crucial for nutrient availability. In summary, [Ruminococcus] torques strain 2789STDY5834841 exemplifies the diversity of gut microbiota in birds and underscores the importance of anaerobic bacteria in avian digestive health. Understanding the role of such strains can provide insights into gut ecology and the potential implications for poultry health management.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusMediterraneibacter
SpeciesMediterraneibacter torques
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Ruminococcus] torques strain 2789STDY5834841
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Ruminococcus] torques strain 2789STDY5834841 genome assembly,

Gene Summary

Adenine Count

862323 bp

Thymine Count

879484 bp

Guanine Count

619368 bp

Cytosine Count

640374 bp

Genome Length

3004151 bp

Protein-coding Genes

2636 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative acyl transferaseERS852456_02660Q9XCW3Positive2891922 - 289310044391.6
abc-type sugar transport system%2c periplasmic componentERS852456_02661P0DUD9Positive2893105 - 289405536076.6
trna and rrna cytosine-c5-methylasesERS852456_02662Not AvailablePositive2894581 - 289573242672.6
abc-type taurine transport system%2c periplasmic componentERS852456_02663C0SP84Positive2895896 - 289639618064.6
abortive infection bacteriophage resistance proteinERS852456_02664Not AvailableNegative2896594 - 289757737535.5
uncharacterised proteinERS852456_02665Not AvailableNegative2897628 - 289791211021.1
predicted transcriptional regulatorERS852456_02666Not AvailablePositive2898151 - 28983637850.94
type i restriction enzyme ecoki subunit rERS852456_02667Q07736Positive2898378 - 290071789730.5
probable type i restriction enzyme bthvorf4518p m proteinERS852456_02668Q47282Positive2900720 - 290220156655.6
type i restriction modification dna specificity domainERS852456_02669P19704Positive2902201 - 290285124574.8

Displaying genes 2621 – 2630 of 2729 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

147 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000837dimethylmaleateC6H6O4Chemical structure of dimethylmaleateNot available
Average142.111Da
Monoisotopic142.027705833Da
BASm00009123-(indol-3-yl)lactateC11H10NO3Chemical structure of 3-(indol-3-yl)lactateNot available
Average204.206Da
Monoisotopic204.0666168Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da

Displaying 1–10 of 147 metabolites

Health Effects

No health effects information available for this bacterium.