[Ruminococcus] torques strain 2789STDY5834841

Gram-positiveCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Mediterraneibacter

Description

[Ruminococcus] torques strain 2789STDY5834841 is a Gram-positive, anaerobic bacterium characterized by its cocci shape. This strain has been identified in the gut environment, specifically associated with the host Gallus gallus (domestic chicken). Notably, it possesses flagella, which may play a role in its motility within the gastrointestinal tract. The strain is categorized under a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and survival in the anaerobic conditions of the gut. The unique ecological niche occupied by [Ruminococcus] torques suggests its potential involvement in the complex microbial community that contributes to digestion and nutrient absorption in its avian host. Given its habitat and characteristics, [Ruminococcus] torques strain 2789STDY5834841 likely participates in various metabolic processes within the gut microbiome. Its presence may influence the overall health of Gallus gallus by aiding in the breakdown of complex carbohydrates and contributing to the fermentation processes that are crucial for nutrient availability. In summary, [Ruminococcus] torques strain 2789STDY5834841 exemplifies the diversity of gut microbiota in birds and underscores the importance of anaerobic bacteria in avian digestive health. Understanding the role of such strains can provide insights into gut ecology and the potential implications for poultry health management.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusMediterraneibacter
SpeciesMediterraneibacter torques
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Ruminococcus] torques strain 2789STDY5834841
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Ruminococcus] torques strain 2789STDY5834841 genome assembly,

Gene Summary

Adenine Count

862323 bp

Thymine Count

879484 bp

Guanine Count

619368 bp

Cytosine Count

640374 bp

Genome Length

3004151 bp

Protein-coding Genes

2636 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase i%2c thermostableERS852456_02363Not AvailablePositive2587595 - 258954772701.3
predicted p-loop atpase and inactivated derivativesERS852456_02364Not AvailablePositive2589561 - 259195490866.7
vrr-nuc domainERS852456_02365Not AvailablePositive2592132 - 259245811673.4
snf2 family n-terminal domainERS852456_02366Not AvailablePositive2592439 - 259380052024.9
uncharacterised proteinERS852456_02367Not AvailablePositive2593778 - 259426318929.7
mrna interferase endoaERS852456_02368Not AvailablePositive2594268 - 259463013389.3
uncharacterised proteinERS852456_02369Not AvailableNegative2594683 - 259498211524.8
redox-sensing transcriptional repressor rexERS852456_02370B0KBS9Positive2595260 - 259599127838.9
nicotinamide nucleotide repair proteinERS852456_02371B5YIM0Positive2596066 - 259760755715.5
alanine racemaseERS852456_02372A4J8G6Positive2597652 - 259880342979.0

Displaying genes 2331 – 2340 of 2729 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

147 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000837dimethylmaleateC6H6O4Chemical structure of dimethylmaleateNot available
Average142.111Da
Monoisotopic142.027705833Da
BASm00009123-(indol-3-yl)lactateC11H10NO3Chemical structure of 3-(indol-3-yl)lactateNot available
Average204.206Da
Monoisotopic204.0666168Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da

Displaying 1–10 of 147 metabolites

Health Effects

No health effects information available for this bacterium.