[Ruminococcus] torques strain 2789STDY5834841

Gram-positiveCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Mediterraneibacter

Description

[Ruminococcus] torques strain 2789STDY5834841 is a Gram-positive, anaerobic bacterium characterized by its cocci shape. This strain has been identified in the gut environment, specifically associated with the host Gallus gallus (domestic chicken). Notably, it possesses flagella, which may play a role in its motility within the gastrointestinal tract. The strain is categorized under a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and survival in the anaerobic conditions of the gut. The unique ecological niche occupied by [Ruminococcus] torques suggests its potential involvement in the complex microbial community that contributes to digestion and nutrient absorption in its avian host. Given its habitat and characteristics, [Ruminococcus] torques strain 2789STDY5834841 likely participates in various metabolic processes within the gut microbiome. Its presence may influence the overall health of Gallus gallus by aiding in the breakdown of complex carbohydrates and contributing to the fermentation processes that are crucial for nutrient availability. In summary, [Ruminococcus] torques strain 2789STDY5834841 exemplifies the diversity of gut microbiota in birds and underscores the importance of anaerobic bacteria in avian digestive health. Understanding the role of such strains can provide insights into gut ecology and the potential implications for poultry health management.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusMediterraneibacter
SpeciesMediterraneibacter torques
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Ruminococcus] torques strain 2789STDY5834841
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Ruminococcus] torques strain 2789STDY5834841 genome assembly,

Gene Summary

Adenine Count

862323 bp

Thymine Count

879484 bp

Guanine Count

619368 bp

Cytosine Count

640374 bp

Genome Length

3004151 bp

Protein-coding Genes

2636 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylphosphotriester-dna--protein-cysteine s-methyltransferaseERS852456_00122Q05587Positive149947 - 15078632757.7
staphylococcal virulence regulator protein aERS852456_00123P54181Negative150797 - 15214948633.1
fe(3+) ions import atp-binding protein fbpcERS852456_00124G2JZ44Negative152157 - 15288227126.5
osmoprotectant-binding proteinERS852456_00125B5Z7I3Negative152960 - 15389534473.9
putative osmoprotectant uptake system permease protein yehwERS852456_00126O34742Negative153995 - 15464822799.0
uncharacterised proteinERS852456_00127Not AvailableNegative154652 - 15497512539.8
bifunctional protein biraERS852456_00128E0U174Negative155093 - 15609137058.6
ornithine carbamoyltransferaseERS852456_00129Q73P70Negative156274 - 15726037184.6
putative trmh family trna/rrna methyltransferaseERS852456_00130P94538Negative157367 - 15815229069.0
ktr system potassium uptake protein aERS852456_00131P39760Negative158170 - 15882623725.0

Displaying genes 191 – 200 of 2729 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

147 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000837dimethylmaleateC6H6O4Chemical structure of dimethylmaleateNot available
Average142.111Da
Monoisotopic142.027705833Da
BASm00009123-(indol-3-yl)lactateC11H10NO3Chemical structure of 3-(indol-3-yl)lactateNot available
Average204.206Da
Monoisotopic204.0666168Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da

Displaying 1–10 of 147 metabolites

Health Effects

No health effects information available for this bacterium.