Coprococcus comes strain 2789STDY5834866

Gram-positiveCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Allocoprococcus

Description

Coprococcus comes strain 2789STDY5834866 is a Gram-positive, anaerobic bacterium characterized by its cocci shape. This strain has been identified as part of the human microbiome, specifically associated with Homo sapiens. It possesses a single replicon, which is indicative of its genomic structure. The anaerobic nature of Coprococcus comes suggests that it thrives in environments where oxygen is limited, such as the human gastrointestinal tract. This ecological niche is critical for its role in digestion and overall gut health. The presence of this bacterium in the human gut microbiota may contribute to various metabolic processes, including the fermentation of dietary fibers, which can influence the overall health of the host. The accession number for this strain is CYZK00000000.1, which allows for further genetic and functional studies to be conducted. Understanding the properties and functions of Coprococcus comes strain 2789STDY5834866 can provide insights into the complex interactions within the gut microbiome and its implications for human health. This strain exemplifies the diverse and specialized roles that different bacteria play in maintaining the balance of microbial communities in the human body.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAllocoprococcus
SpeciesAllocoprococcus comes
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprococcus comes strain 2789STDY5834866 genome assembly, contig:

Gene Summary

Adenine Count

978505 bp

Thymine Count

914396 bp

Guanine Count

730379 bp

Cytosine Count

660411 bp

Genome Length

3284337 bp

Protein-coding Genes

3056 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
maltose-binding periplasmic proteins/domainsERS852481_00039Not AvailableNegative46887 - 4824550855.7
methylphosphotriester-dna--protein-cysteine s-methyltransferaseERS852481_00040Not AvailableNegative48540 - 4936432390.1
duf based on e. rectale gene descriptionERS852481_00041Not AvailableNegative49596 - 5062140313.1
uncharacterized protein involved in cytokinesis%2c contains tgc (transglutaminase/protease-like) domainERS852481_00042Not AvailableNegative50622 - 5165039878.7
inner membrane protein ypdaERS852481_00043Not AvailableNegative51919 - 5370968832.2
uncharacterized response regulatory protein sa0215ERS852481_00044Not AvailableNegative53718 - 5531062285.4
inner membrane abc transporter permease protein ytftERS852481_00045Not AvailableNegative55427 - 5641335797.5
abc-type sugar transport system%2c periplasmic componentERS852481_00046Not AvailableNegative56449 - 5763943395.9
ribose transport system permease protein rbscERS852481_00047P0AGI3Negative57675 - 5861633223.2
ribose import atp-binding protein rbsaERS852481_00048Q8RBQ1Negative58628 - 6012155218.4

Displaying genes 111 – 120 of 3153 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

162 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da

Displaying 1–10 of 162 metabolites

Health Effects

No health effects information available for this bacterium.