Catenibacterium mitsuokai strain 2789STDY5608825

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Erysipelotrichia

Order

Erysipelotrichales

Family

Coprobacillaceae

Genus

Catenibacterium

Description

Catenibacterium mitsuokai strain 2789STDY5608825 is a Gram-positive, anaerobic bacterium that has been identified as a member of the human microbiota. This strain possesses a single replicon, indicating a streamlined genomic structure. Its association with Homo sapiens highlights its potential role in human health and microbiome dynamics. As an anaerobe, C. mitsuokai is capable of thriving in oxygen-deprived environments, which is characteristic of many gut bacteria. The presence of this organism in the human microbiome suggests it may contribute to various metabolic processes, including fermentation, which can influence nutrient absorption and overall gut health. The strain is cataloged with the accession number CYZB00000000.1, which facilitates its identification and study within microbial databases. Understanding the specific roles and interactions of C. mitsuokai within the human microbiome can provide insights into its ecological functions, such as its involvement in maintaining gut homeostasis or its potential impact on health-related conditions. In summary, Catenibacterium mitsuokai strain 2789STDY5608825 exemplifies the diversity of anaerobic bacteria residing in the human body, and further research on this strain may enhance our understanding of its ecological significance and contributions to human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassErysipelotrichia
OrderErysipelotrichales
FamilyCoprobacillaceae
GenusCatenibacterium
SpeciesCatenibacterium mitsuokai
Strainstrain 2789STDY5608825

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Catenibacterium mitsuokai strain 2789STDY5608825 genome assembly,

Gene Summary

Adenine Count

2002632 bp

Thymine Count

1972089 bp

Guanine Count

1435558 bp

Cytosine Count

1441903 bp

Genome Length

6920660 bp

Protein-coding Genes

6045 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate 5-kinaseERS852383_00041Not AvailableNegative44399 - 4547839656.7
uncharacterised proteinERS852383_00042Not AvailableNegative45468 - 457078745.31
glutamate racemaseERS852383_00043Not AvailableNegative45783 - 4662231091.6
periplasmic chaperoneERS852383_00044Not AvailableNegative46732 - 4723819052.2
periplasmic chaperoneERS852383_00045Not AvailableNegative47367 - 4788219326.0
outer membrane protein omp85 precursorERS852383_00046Not AvailableNegative47931 - 50570101252.0
undecaprenyl pyrophosphate synthaseERS852383_00047Not AvailableNegative50623 - 5136028445.8
uncharacterised proteinERS852383_00048Not AvailableNegative51363 - 5272750251.4
riboflavin biosynthesis protein ribdERS852383_00049Not AvailableNegative52862 - 5391739462.6
release factor glutamine methyltransferaseERS852383_00050Not AvailablePositive53992 - 5482831332.5

Displaying genes 41 – 50 of 6045 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

190 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da

Displaying 1–10 of 190 metabolites

Health Effects

No health effects information available for this bacterium.