Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ctp pyrophosphohydrolase | TRN7648_00016 | P77788 | Positive | 22963 - 23361 | 14841.1 |
| hypothetical protein | TRN7648_00017 | Not Available | Positive | 23550 - 23696 | 5046.16 |
| translation initiation factor if-2 | TRN7648_00018 | Q5LWL4 | Negative | 23860 - 26352 | 89212.7 |
| hypothetical protein | TRN7648_00019 | Not Available | Negative | 26362 - 26997 | 22384.2 |
| hypothetical protein | TRN7648_00020 | Q92HF4 | Negative | 27004 - 28617 | 60304.2 |
| ribosome maturation factor rimp | TRN7648_00021 | Q1GCH5 | Negative | 28622 - 29209 | 21691.8 |
| 3-dehydroquinate dehydratase | TRN7648_00022 | Q3IWV4 | Negative | 29359 - 29787 | 15697.9 |
| phytochrome-like protein cph1 | TRN7648_00023 | Not Available | Positive | 30026 - 31198 | 43464.0 |
| sensory/regulatory protein rpfc | TRN7648_00024 | Not Available | Positive | 31195 - 31602 | 15257.5 |
| Trna-leu | Not Available | Not Available | Positive | 31689 - 31775 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
