Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TRN7648_00006 | Not Available | Negative | 6880 - 7563 | 25161.7 |
| integrase core domain protein | TRN7648_00007 | Not Available | Negative | 7764 - 10085 | 88022.9 |
| hypothetical protein | TRN7648_00008 | Not Available | Negative | 10085 - 10762 | 25435.6 |
| hypothetical protein | TRN7648_00009 | Not Available | Negative | 11092 - 11601 | 18623.1 |
| hypothetical protein | TRN7648_00010 | Not Available | Positive | 12504 - 13514 | 38310.1 |
| hypothetical protein | TRN7648_00011 | Not Available | Positive | 13839 - 15041 | 45651.9 |
| atpase involved in dna repair | TRN7648_00012 | Not Available | Positive | 15523 - 17457 | 72802.2 |
| preprotein translocase subunit seca | TRN7648_00013 | Q5LWK0 | Negative | 17943 - 20666 | 101497.0 |
| putative parvulin-type peptidyl-prolyl cis-trans isomerase precursor | TRN7648_00014 | Q7WCX5 | Positive | 20839 - 21687 | 30252.8 |
| arginine biosynthesis bifunctional protein argj | TRN7648_00015 | Q5LWL6 | Positive | 21688 - 22911 | 41571.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
