Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna methylase | TRN7648_03543 | P14243 | Negative | 3675781 - 3677007 | 45235.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 143 - 252 | Not Available |
| 23s ribosomal rna (partial) | Not Available | Not Available | Positive | 506 - 1763 | 18.01 |
| hypothetical protein | TRN7648_00001 | Not Available | Negative | 626 - 1492 | 31418.0 |
| 23s ribosomal rna (partial) | Not Available | Not Available | Positive | 1816 - 3314 | 18.01 |
| hypothetical protein | TRN7648_00002 | Not Available | Negative | 1503 - 2072 | 20681.9 |
| bacterial tnib protein | TRN7648_00003 | Not Available | Negative | 2072 - 3049 | 35745.5 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4074 - 5551 | Not Available |
| hypothetical protein | TRN7648_00004 | Not Available | Positive | 4217 - 6139 | 71505.1 |
| hypothetical protein | TRN7648_00005 | Not Available | Positive | 6521 - 6688 | 6062.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
