Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | TRN7648_03533 | P36693 | Negative | 3668924 - 3670690 | 65953.4 |
| Protoporphyrinogen oxidase | TRN7648_03534 | Not Available | Negative | 3670749 - 3671345 | 21293.1 |
| hypothetical protein | TRN7648_03535 | Not Available | Positive | 3671461 - 3671643 | 6602.15 |
| Hypothetical protein | TRN7648_03536 | Not Available | Positive | 3671656 - 3671904 | 9402.04 |
| hypothetical protein | TRN7648_03537 | Not Available | Positive | 3671999 - 3672502 | 17518.3 |
| hypothetical protein | TRN7648_03538 | Not Available | Negative | 3672585 - 3673166 | 21825.2 |
| Hypothetical protein | TRN7648_03539 | Not Available | Negative | 3673185 - 3673433 | 9112.45 |
| hypothetical protein | TRN7648_03540 | Not Available | Negative | 3673430 - 3673912 | 17635.9 |
| Is110-like element is621 family transposase | TRN7648_03541 | P19257 | Negative | 3674479 - 3675411 | 33933.6 |
| hypothetical protein | TRN7648_03542 | Not Available | Negative | 3675492 - 3675773 | 9623.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
