Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine synthase b | TRN7648_00306 | Q5LLT4 | Negative | 312138 - 313049 | 32770.1 |
| multidrug export protein mepa | TRN7648_00307 | Q8EIX5 | Negative | 313109 - 314449 | 45426.2 |
| hypothetical protein | TRN7648_00308 | Q3J5J7 | Negative | 314529 - 314855 | 11407.1 |
| methionine--trna ligase | TRN7648_00309 | Q5LTL1 | Negative | 314965 - 316677 | 64192.4 |
| 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase | TRN7648_00310 | Q9F7E0 | Negative | 316771 - 317262 | 16740.0 |
| putative mfs-type transporter ycad | TRN7648_00311 | Not Available | Negative | 317635 - 318861 | 43039.2 |
| hypothetical protein | TRN7648_00312 | Not Available | Negative | 318896 - 319492 | 21735.4 |
| hypothetical protein | TRN7648_00313 | Not Available | Positive | 319609 - 320031 | 14914.1 |
| general stress protein 69 | TRN7648_00314 | P0A9T4 | Positive | 320122 - 321162 | 37776.9 |
| phosphonate utilization associated putative membrane protein | TRN7648_00315 | Not Available | Positive | 321262 - 322164 | 31555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
