Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | TRN7648_00266 | Q163E9 | Positive | 276669 - 277577 | 31210.8 |
| octaprenyl-diphosphate synthase | TRN7648_00267 | P0AD57 | Negative | 277570 - 278568 | 36243.2 |
| hypothetical protein | TRN7648_00268 | Not Available | Positive | 278620 - 278835 | 8007.82 |
| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase | TRN7648_00269 | Not Available | Positive | 278777 - 279598 | 29069.4 |
| hypothetical protein | TRN7648_00270 | Not Available | Positive | 279715 - 279891 | 6513.87 |
| putative ring-cleaving dioxygenase mhqo | TRN7648_00271 | P96693 | Negative | 280048 - 280977 | 34133.9 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | TRN7648_00272 | P50205 | Negative | 281121 - 281843 | 25254.1 |
| acetyl-coa acetyltransferase | TRN7648_00273 | P54810 | Negative | 282009 - 283184 | 40705.6 |
| cyclic di-gmp phosphodiesterase yfgf | TRN7648_00274 | Q04855 | Negative | 283326 - 284159 | 30931.2 |
| 30s ribosomal protein s4 | TRN7648_00275 | A8LK98 | Positive | 284511 - 285131 | 23720.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
