Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit alpha | TRN7648_00226 | Q1GEU6 | Positive | 238949 - 240487 | 54993.8 |
| f-atpase gamma subunit | TRN7648_00227 | Q5LNP0 | Positive | 240500 - 241378 | 31615.8 |
| atp synthase subunit beta | TRN7648_00228 | Q1GEU8 | Positive | 241397 - 242821 | 50886.6 |
| f-atpase epsilon subunit | TRN7648_00229 | Q162T0 | Positive | 242875 - 243309 | 15299.3 |
| inner membrane protein | TRN7648_00230 | Q89AB7 | Positive | 243427 - 244074 | 22642.5 |
| h-type lectin domain protein | TRN7648_00231 | P05450 | Positive | 244169 - 244519 | 13183.5 |
| ribose-phosphate pyrophosphokinase | TRN7648_00232 | B9KPJ0 | Negative | 244628 - 245635 | 36337.1 |
| 2-hydroxychromene-2-carboxylate isomerase | TRN7648_00233 | Not Available | Positive | 245784 - 246383 | 21453.3 |
| dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system | TRN7648_00234 | Not Available | Positive | 246401 - 247192 | 27481.1 |
| g3p acyltransferase | TRN7648_00235 | Q5LX62 | Negative | 247229 - 247834 | 21002.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
