Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative succinyl-diaminopimelate desuccinylase | TRN7648_00216 | Q4KHI7 | Negative | 226382 - 227656 | 46618.2 |
| hypothetical protein | TRN7648_00217 | Not Available | Negative | 227699 - 228655 | 33726.4 |
| putative protein involved in cation transport | TRN7648_00218 | Q84MC1 | Positive | 228722 - 229255 | 19818.4 |
| hypothetical protein | TRN7648_00219 | Not Available | Positive | 229346 - 230503 | 41985.9 |
| inner membrane lipoprotein yiad precursor | TRN7648_00220 | Not Available | Positive | 230504 - 232930 | 86803.5 |
| putative peptidase | TRN7648_00221 | Not Available | Negative | 232987 - 233940 | 33900.4 |
| atp-dependent clp protease atp-binding subunit clpa | TRN7648_00222 | P05444 | Negative | 233940 - 236273 | 84688.1 |
| hydroxyacylglutathione hydrolase | TRN7648_00223 | Q5LNN5 | Negative | 236420 - 237181 | 26857.0 |
| methyltransferase domain protein | TRN7648_00224 | P05447 | Positive | 237244 - 238008 | 28294.6 |
| f-type atpase subunit delta | TRN7648_00225 | A8LJR7 | Positive | 238388 - 238948 | 19673.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
