Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione transport system permease protein gsic | TRN7648_00206 | Q8VQK4 | Negative | 215403 - 216341 | 33972.7 |
| hypothetical protein | TRN7648_00207 | Not Available | Negative | 216434 - 217750 | 45702.6 |
| demethylspheroidene o-methyltransferase | TRN7648_00208 | D5AP78 | Positive | 217926 - 218942 | 35974.7 |
| hypothetical protein | TRN7648_00209 | Not Available | Negative | 218949 - 219521 | 21498.7 |
| hypothetical protein | TRN7648_00210 | Not Available | Negative | 219586 - 220992 | 50749.6 |
| hemin-binding lipoprotein | TRN7648_00211 | P33950 | Negative | 221051 - 222526 | 53092.2 |
| hypothetical protein | TRN7648_00212 | Not Available | Positive | 222701 - 224029 | 48269.1 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | TRN7648_00213 | Q16DW5 | Positive | 224120 - 224944 | 28636.0 |
| pantothenate synthetase | TRN7648_00214 | Q16DW6 | Positive | 224941 - 225783 | 30351.3 |
| hypothetical protein | TRN7648_00215 | Not Available | Positive | 225875 - 226291 | 15352.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
