Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative l-lactate dehydrogenase operon regulatory protein | TRN7648_00176 | Not Available | Negative | 179099 - 179821 | 26488.7 |
| acrylyl-coa reductase acui | TRN7648_00177 | Q5LS56 | Positive | 179907 - 180896 | 34274.4 |
| autotransporter assembly factor tamb | TRN7648_00178 | Not Available | Negative | 180948 - 185012 | 139146.0 |
| autotransporter assembly factor tama | TRN7648_00179 | D2TN56 | Negative | 185012 - 186802 | 63419.9 |
| hypothetical protein | TRN7648_00180 | Not Available | Positive | 187134 - 187868 | 26662.1 |
| vcbs repeat | TRN7648_00181 | Not Available | Positive | 188517 - 190592 | 70053.7 |
| cyclolysin | TRN7648_00182 | Not Available | Positive | 190538 - 195694 | 179151.0 |
| vcbs repeat | TRN7648_00183 | Not Available | Positive | 195739 - 197349 | 56192.0 |
| hypothetical protein | TRN7648_00184 | Not Available | Positive | 197352 - 199205 | 65175.6 |
| prophage cp4-57 integrase | TRN7648_00185 | P32053 | Positive | 199542 - 200723 | 44011.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
