Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-protein kinase etk | TRN7648_00166 | Not Available | Positive | 167177 - 168826 | 61436.7 |
| outer membrane n-deacetylase | TRN7648_00167 | Not Available | Positive | 168861 - 169967 | 40782.9 |
| putative o-glycosylation ligase, exosortase a-associated | TRN7648_00168 | Not Available | Positive | 169967 - 171379 | 49904.2 |
| putative undecaprenyl-phosphate n-acetylgalactosaminyl 1-phosphate transferase | TRN7648_00169 | Not Available | Positive | 171630 - 172637 | 37371.5 |
| n-acetylgalactosamine-n, n'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-n-acetylgalactosaminyltransferase | TRN7648_00170 | Not Available | Positive | 172656 - 173750 | 39069.5 |
| sulfotransferase domain protein | TRN7648_00171 | Not Available | Negative | 173747 - 174673 | 34848.6 |
| poly-beta-1,6-n-acetyl-d-glucosamine synthase | TRN7648_00172 | Not Available | Negative | 174675 - 175820 | 41595.3 |
| gdp-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase | TRN7648_00173 | Q58577 | Negative | 175817 - 177001 | 42459.4 |
| outer membrane protein class 4 precursor | TRN7648_00174 | Not Available | Negative | 177141 - 177764 | 22068.2 |
| v8-like glu-specific endopeptidase | TRN7648_00175 | Not Available | Positive | 177882 - 179066 | 41924.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
