Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TRN7648_02865 | Not Available | Positive | 2959085 - 2959285 | 7242.78 |
| Putative tail tape measure protein | TRN7648_02866 | Not Available | Positive | 2959282 - 2959944 | 22524.0 |
| Tail protein | TRN7648_02867 | Not Available | Positive | 2959957 - 2960589 | 23326.6 |
| Minor tail protein | TRN7648_02868 | Not Available | Positive | 2960589 - 2961470 | 31927.5 |
| Gta-like protein | TRN7648_02869 | Not Available | Positive | 2961467 - 2961898 | 15565.6 |
| Tail protein | TRN7648_02870 | Not Available | Positive | 2961901 - 2965836 | 142582.0 |
| serine acetyltransferase | TRN7648_02871 | P0A9D6 | Positive | 2965981 - 2966793 | 29366.4 |
| dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | TRN7648_02872 | Q9R9N3 | Negative | 2966867 - 2968171 | 44921.9 |
| Putative transketolase central region-containing protein | TRN7648_02873 | Q9R9N4 | Negative | 2968254 - 2969621 | 48842.4 |
| Tail protein | TRN7648_03512 | Not Available | Negative | 3650808 - 3654773 | 141718.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
