Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | TRN7648_00096 | Not Available | Negative | 101485 - 101787 | 11389.6 |
| hypothetical protein | TRN7648_00097 | Not Available | Negative | 101780 - 102385 | 22787.9 |
| hypothetical protein | TRN7648_00098 | Not Available | Negative | 102420 - 103022 | 22198.0 |
| hypothetical protein | TRN7648_00099 | Not Available | Negative | 103019 - 103522 | 17977.3 |
| hypothetical protein | TRN7648_00100 | Not Available | Negative | 103522 - 104049 | 19896.3 |
| acetyltransferase (gnat) family protein | TRN7648_00101 | Not Available | Negative | 104046 - 104579 | 19481.9 |
| p48 | TRN7648_00102 | P0AGD9 | Negative | 104660 - 106174 | 53727.7 |
| glycerophosphoryl diester phosphodiesterase | TRN7648_00103 | Not Available | Negative | 106389 - 107330 | 33866.5 |
| fmn-dependent nadh-azoreductase | TRN7648_00104 | Q28UD5 | Negative | 107400 - 107981 | 20747.8 |
| d-malate degradation protein r | TRN7648_00105 | Not Available | Positive | 108114 - 108995 | 32546.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
