Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicibacter |
| Species | Tropicibacter naphthalenivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
817496 bp
Thymine Count
824188 bp
Guanine Count
1422123 bp
Cytosine Count
1395383 bp
Genome Length
4459382 bp
Protein-coding Genes
4187 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lysine decarboxylase | TRN7648_00066 | Not Available | Positive | 69484 - 70326 | 31287.5 |
| udp-n-acetyl-alpha-d-glucosamine c6 dehydratase | TRN7648_00067 | P39853 | Negative | 70330 - 72198 | 66901.9 |
| aspartate-semialdehyde dehydrogenase 2 | TRN7648_00068 | O67716 | Positive | 72561 - 73583 | 37445.6 |
| hypothetical protein | TRN7648_00069 | Not Available | Negative | 73891 - 74352 | 17037.6 |
| hypothetical protein | TRN7648_00070 | Not Available | Positive | 74477 - 74794 | 11192.4 |
| carbonic anhydrase 1 | TRN7648_00071 | P46513 | Negative | 74805 - 75446 | 23582.0 |
| hypothetical protein | TRN7648_00072 | Not Available | Positive | 75517 - 75972 | 17142.7 |
| cytosol aminopeptidase | TRN7648_00073 | A7NG41 | Positive | 76031 - 77413 | 47537.1 |
| dipeptidyl-peptidase 6 | TRN7648_00074 | Not Available | Positive | 77410 - 78258 | 30481.8 |
| guanidinobutyrase | TRN7648_00075 | Q9I6K2 | Positive | 78311 - 79261 | 34453.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
