Idiomarina woesei

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Idiomarina woesei is a notable marine bacterium characterized by its unique genomic and ecological traits. One of its defining features is the presence of a single replicon, which indicates a streamlined genetic architecture. The bacterium is cataloged under the accession number CYHB00000000.1, which provides a reference point for its genetic sequencing and related research. This organism is part of a larger microbial community found in marine environments, where it likely plays a role in biogeochemical cycles. While specific metabolic pathways and ecological interactions are not detailed in the available data, the presence of Idiomarina woesei within marine ecosystems suggests that it may contribute to nutrient cycling or other ecological processes. The single replicon structure of Idiomarina woesei may afford advantages in terms of genetic stability and efficiency, potentially allowing it to thrive in the dynamic conditions of its marine habitat. Understanding such traits can provide insights into the adaptability and ecological significance of marine bacteria, highlighting their role in sustaining marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina woesei
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina woesei genome assembly JGI assembly, contig

Gene Summary

Adenine Count

636188 bp

Thymine Count

636338 bp

Guanine Count

575559 bp

Cytosine Count

589601 bp

Genome Length

2437751 bp

Protein-coding Genes

2287 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid/polyamine/organocation transporter, apc superfamily (tc 2.a.3)Ga0061064_0039Not AvailablePositive34128 - 3543846891.4
glutaredoxinGa0061064_0040Not AvailableNegative35465 - 3621127855.2
signal peptidase ii . aspartic peptidase. merops family a08Ga0061064_0042Not AvailableNegative37382 - 3789418815.8
heavy-metal-associated domain/cation efflux familyGa0061064_0043Not AvailableNegative37898 - 3879431268.2
transcriptional regulator, merr familyGa0061064_0044Not AvailablePositive38890 - 3929715135.0
hypothetical proteinGa0061064_0045Not AvailablePositive39523 - 3985212214.7
outer membrane protein tolcGa0061064_0046Not AvailablePositive40023 - 4131247721.0
rnd family efflux transporter, mfp subunitGa0061064_0047Not AvailablePositive41314 - 4284056056.6
heavy metal efflux pump, czca familyGa0061064_0048Not AvailablePositive42833 - 45958113937.0
hypothetical proteinGa0061064_0049Not AvailablePositive46058 - 4642313573.0

Displaying genes 41 – 50 of 2341 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.