Idiomarina woesei

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Idiomarina woesei is a notable marine bacterium characterized by its unique genomic and ecological traits. One of its defining features is the presence of a single replicon, which indicates a streamlined genetic architecture. The bacterium is cataloged under the accession number CYHB00000000.1, which provides a reference point for its genetic sequencing and related research. This organism is part of a larger microbial community found in marine environments, where it likely plays a role in biogeochemical cycles. While specific metabolic pathways and ecological interactions are not detailed in the available data, the presence of Idiomarina woesei within marine ecosystems suggests that it may contribute to nutrient cycling or other ecological processes. The single replicon structure of Idiomarina woesei may afford advantages in terms of genetic stability and efficiency, potentially allowing it to thrive in the dynamic conditions of its marine habitat. Understanding such traits can provide insights into the adaptability and ecological significance of marine bacteria, highlighting their role in sustaining marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina woesei
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina woesei genome assembly JGI assembly, contig

Gene Summary

Adenine Count

636188 bp

Thymine Count

636338 bp

Guanine Count

575559 bp

Cytosine Count

589601 bp

Genome Length

2437751 bp

Protein-coding Genes

2287 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinGa0061064_0018Not AvailablePositive16156 - 163206372.66
hypothetical proteinGa0061064_0019Not AvailableNegative16830 - 169795479.63
merc mercury resistance proteinGa0061064_0020Not AvailableNegative17033 - 1742214097.6
dna-binding transcriptional regulator, merr familyGa0061064_0021Not AvailableNegative17488 - 1786514049.2
hypothetical proteinGa0061064_0022Not AvailablePositive18038 - 1857719133.0
uncharacterized inner membrane protein ynfa, drug/metabolite transporter superfamilyGa0061064_0024Not AvailableNegative19689 - 2002412156.3
cation diffusion facilitator family transporterGa0061064_0025Not AvailableNegative20027 - 2091432932.9
heavy metal efflux pump, czca familyGa0061064_0026Not AvailableNegative20974 - 24171115220.0
multidrug efflux pump subunit acra (membrane-fusion protein)Ga0061064_0027Not AvailableNegative24183 - 2532842113.5
outer membrane protein tolcGa0061064_0028Not AvailableNegative25332 - 2658246534.4

Displaying genes 21 – 30 of 2341 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.