Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit beta | NIG5292_00727 | Q52671 | Positive | 736479 - 737723 | 44815.9 |
| hypothetical protein | NIG5292_00728 | Not Available | Positive | 737723 - 738028 | 10524.6 |
| sarcosine oxidase, delta subunit family | NIG5292_00729 | Not Available | Positive | 738022 - 738351 | 12179.2 |
| aminomethyltransferase | NIG5292_00730 | Not Available | Positive | 738348 - 741383 | 109815.0 |
| sarcosine oxidase, gamma subunit family | NIG5292_00731 | Not Available | Positive | 741376 - 741942 | 19949.3 |
| superoxide dismutase | NIG5292_00732 | O30970 | Positive | 742061 - 742660 | 22172.8 |
| putative chloramphenical resistance permease rard | NIG5292_00733 | P83936 | Positive | 742791 - 743636 | 30430.4 |
| lysm domain/bon superfamily protein | NIG5292_00734 | Not Available | Positive | 743723 - 744835 | 38386.8 |
| tyrosine--trna ligase | NIG5292_00735 | Q1GI60 | Negative | 744903 - 746153 | 45686.7 |
| anhydro-n-acetylmuramic acid kinase | NIG5292_00736 | Q5LQK6 | Positive | 746263 - 747330 | 37535.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
