Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | Positive | 2436177 - 2436191 | Not Available |
| Major spike protein | NIG5292_02680 | P03643 | Positive | 2672646 - 2672990 | 12469.9 |
| Minor spike protein | NIG5292_02681 | P03646 | Positive | 2672999 - 2673985 | 34449.3 |
| Dna replication initiation protein gpa | NIG5292_02682 | P03631 | Positive | 2674049 - 2675590 | 58721.8 |
| C | NIG5292_02683 | P69172 | Positive | 2675587 - 2675847 | 10081.0 |
| External scaffolding protein | NIG5292_02684 | P69486 | Positive | 2675844 - 2676302 | 16938.3 |
| Dna packaging protein | NIG5292_02685 | P69592 | Positive | 2676302 - 2676418 | 4227.24 |
| Capsid protein | NIG5292_02686 | P03641 | Positive | 2676455 - 2677738 | 48485.4 |
| 16s ribosomal rna (partial) | Not Available | Not Available | Positive | 2 - 452 | 18.01 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 60 - 169 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
