Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antiporter inner membrane protein | NIG5292_00587 | P45135 | Positive | 589741 - 590835 | 37353.5 |
| cell division protein mraz | NIG5292_00588 | Q5LU80 | Positive | 591483 - 591977 | 18573.7 |
| ribosomal rna small subunit methyltransferase h | NIG5292_00589 | Q5LU79 | Positive | 591981 - 592970 | 34919.8 |
| putative secreted (periplasmic) protein | NIG5292_00590 | Not Available | Positive | 592974 - 593327 | 13081.8 |
| peptidoglycan synthase ftsi | NIG5292_00591 | P0AD69 | Positive | 593324 - 595117 | 64939.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | NIG5292_00592 | Q89FU2 | Positive | 595192 - 596661 | 51493.5 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | NIG5292_00593 | Q92H60 | Positive | 596663 - 598105 | 50157.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | NIG5292_00594 | Q1GF14 | Positive | 598136 - 599218 | 39023.4 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | NIG5292_00595 | A3PHS4 | Positive | 599275 - 600675 | 49508.5 |
| flavoprotein, family | NIG5292_00596 | P37631 | Negative | 600687 - 601940 | 44545.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
