Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | NIG5292_00577 | Q1GEZ5 | Negative | 578847 - 579566 | 24867.8 |
| hypothetical protein | NIG5292_00578 | Not Available | Positive | 579690 - 580073 | 13441.3 |
| imidazole glycerol phosphate synthase subunit hish 1 | NIG5292_00579 | O33565 | Negative | 580180 - 580818 | 23584.0 |
| imidazoleglycerol-phosphate dehydratase | NIG5292_00580 | Q5LU92 | Negative | 580819 - 581409 | 21499.6 |
| Trna-gly | Not Available | Not Available | Positive | 581614 - 581688 | Not Available |
| 2-oxoglutarate carboxylase small subunit | NIG5292_00582 | Q9KWU4 | Negative | 581873 - 585316 | 125149.0 |
| atp-dependent dna helicase pcra | NIG5292_00583 | Q92HZ6 | Positive | 585490 - 587850 | 87101.7 |
| cysteine/o-acetylserine efflux protein | NIG5292_00584 | Not Available | Negative | 587865 - 588461 | 21395.1 |
| cysteine/o-acetylserine efflux protein | NIG5292_00585 | A6T515 | Negative | 588471 - 589076 | 21950.3 |
| hypothetical protein | NIG5292_00586 | Not Available | Negative | 589240 - 589458 | 8071.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
