Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase d | NIG5292_00547 | P50513 | Positive | 548422 - 549441 | 36478.9 |
| rna polymerase sigma-32 factor | NIG5292_00548 | Not Available | Positive | 549561 - 550457 | 33850.4 |
| hydroxypyruvate isomerase | NIG5292_00549 | Q0KBD1 | Negative | 550550 - 551314 | 27602.8 |
| 2-hydroxy-3-oxopropionate reductase | NIG5292_00550 | Q0KBC7 | Negative | 551311 - 552210 | 30559.5 |
| oligoendopeptidase f, plasmid | NIG5292_00551 | Not Available | Negative | 552212 - 554011 | 67225.3 |
| putative dna ligase-like protein/mt0965 | NIG5292_00552 | Q1II25 | Negative | 554104 - 555693 | 60047.1 |
| putative exonuclease, dna ligase-associated | NIG5292_00553 | Not Available | Negative | 555693 - 556730 | 37557.9 |
| 4-hydroxy-2-oxovalerate aldolase | NIG5292_00554 | Not Available | Positive | 556820 - 557578 | 26877.9 |
| phospholipase ytpa | NIG5292_00555 | Not Available | Negative | 557585 - 558523 | 34351.3 |
| putative sterol carrier protein | NIG5292_00556 | Not Available | Negative | 558529 - 558819 | 9640.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
