Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase, gamma subunit family | NIG5292_00437 | Not Available | Negative | 439519 - 440085 | 20289.0 |
| aminomethyltransferase | NIG5292_00438 | O87386 | Negative | 440078 - 443068 | 107544.0 |
| sarcosine oxidase, delta subunit family | NIG5292_00439 | O87387 | Negative | 443068 - 443382 | 11568.5 |
| sarcosine oxidase subunit beta | NIG5292_00440 | O87388 | Negative | 443382 - 444632 | 45592.6 |
| aminomethyltransferase | NIG5292_00441 | Q63342 | Negative | 444683 - 447103 | 88707.3 |
| hypothetical protein | NIG5292_00442 | Not Available | Negative | 447149 - 447451 | 10560.7 |
| salicylate 5-hydroxylase, large oxygenase component | NIG5292_00443 | Q52028 | Negative | 447454 - 448605 | 43127.5 |
| gcv operon activator | NIG5292_00444 | Not Available | Negative | 448699 - 449622 | 33831.5 |
| xylose isomerase | NIG5292_00445 | Q162B6 | Negative | 449735 - 451027 | 48035.5 |
| xylulose kinase | NIG5292_00446 | P09099 | Negative | 451029 - 452465 | 50004.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
