Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type uncharacterized transport system, periplasmic component | NIG5292_00397 | Not Available | Positive | 402036 - 403151 | 40600.3 |
| spermidine/putrescine transport system permease protein potb | NIG5292_00398 | P0A2J8 | Positive | 403266 - 404933 | 61328.7 |
| inner membrane abc transporter permease protein ydcv | NIG5292_00399 | P0A625 | Positive | 404937 - 406151 | 43431.1 |
| d-amino acid dehydrogenase small subunit | NIG5292_00400 | Q8XX54 | Positive | 406305 - 407561 | 44846.5 |
| (2r)-3-sulfolactate dehydrogenase (nadp(+)) | NIG5292_00401 | Q7CVK1 | Positive | 407593 - 408627 | 36337.2 |
| hypothetical protein | NIG5292_00402 | Not Available | Negative | 408787 - 409113 | 11271.3 |
| Trna-arg | Not Available | Not Available | Positive | 409393 - 409469 | Not Available |
| cysteine desulfurase | NIG5292_00404 | B7NTV6 | Negative | 409543 - 410763 | 44123.9 |
| yip1 domain protein | NIG5292_00405 | Not Available | Negative | 410791 - 411372 | 20863.5 |
| hypothetical protein | NIG5292_00406 | Not Available | Negative | 411369 - 411803 | 16242.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
