Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-destabilizing protein | NIG5292_00347 | Q9ZAQ8 | Positive | 350251 - 350766 | 18291.2 |
| 3-dehydroquinate synthase | NIG5292_00348 | Q1GGQ1 | Negative | 350839 - 351975 | 40259.6 |
| shikimate kinase | NIG5292_00349 | Q3J2I9 | Negative | 351981 - 352532 | 20141.2 |
| hypothetical protein | NIG5292_00350 | Not Available | Positive | 352913 - 354502 | 56068.9 |
| tyrosine recombinase xerd | NIG5292_00351 | Q89XW5 | Positive | 354499 - 355452 | 35301.4 |
| magnesium and cobalt efflux protein corc | NIG5292_00352 | Q57017 | Positive | 355536 - 356825 | 46299.3 |
| type iv secretion/conjugal transfer atpase, virb4 family | NIG5292_00353 | P39342 | Negative | 356854 - 358410 | 56240.5 |
| invasion protein b, involved in pathogenesis | NIG5292_00354 | Not Available | Positive | 358901 - 359539 | 22194.4 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | NIG5292_00355 | P72331 | Negative | 359613 - 360824 | 42284.5 |
| acyl carrier protein | NIG5292_00356 | Not Available | Negative | 360824 - 361081 | 9021.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
