Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein transport protein (ompp1/fadl/todx) | NIG5292_00307 | Not Available | Positive | 310866 - 311828 | 33263.5 |
| hypothetical protein | NIG5292_00308 | Not Available | Positive | 311976 - 312827 | 32369.4 |
| homoserine o-succinyltransferase | NIG5292_00309 | Q165M8 | Positive | 312844 - 313758 | 34599.9 |
| 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase | NIG5292_00310 | Not Available | Positive | 313709 - 314713 | 36024.6 |
| polyphosphate kinase 2 | NIG5292_00311 | Q5LSN8 | Positive | 314771 - 315646 | 33338.8 |
| spermidine/putrescine import atp-binding protein pota | NIG5292_00312 | Q1AS06 | Negative | 315650 - 316699 | 38327.4 |
| inner membrane abc transporter permease protein ydcv | NIG5292_00313 | P45169 | Negative | 316696 - 317487 | 28871.3 |
| putrescine transport system permease protein poth | NIG5292_00314 | Not Available | Negative | 317484 - 318353 | 31692.8 |
| hypothetical protein | NIG5292_00315 | Not Available | Negative | 318395 - 319189 | 29420.4 |
| hypothetical protein | NIG5292_00316 | A4WUK1 | Negative | 319345 - 319836 | 17787.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
