Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | NIG5292_02714 | Q1AWA3 | Positive | 2700520 - 2701317 | 27558.3 |
| succinate-semialdehyde dehydrogenase | NIG5292_02715 | Q9I6M5 | Positive | 2701314 - 2702783 | 51755.0 |
| dihydrolipoyl dehydrogenase | NIG5292_02716 | P50970 | Positive | 2702780 - 2704180 | 49652.4 |
| hypothetical protein | NIG5292_02717 | Not Available | Positive | 2704158 - 2704484 | 11540.2 |
| transposase is116/is110/is902 family protein | NIG5292_02718 | Not Available | Positive | 2704568 - 2705596 | 37899.6 |
| transposon tn7 transposition protein tnsb | NIG5292_02719 | Not Available | Positive | 2705752 - 2707392 | 60908.0 |
| bacterial tnib protein | NIG5292_02720 | Not Available | Positive | 2707394 - 2707795 | 14437.6 |
| transposase | NIG5292_02721 | Not Available | Positive | 2707967 - 2708242 | 10427.5 |
| putative transposase orfb | NIG5292_02722 | P0CF79 | Positive | 2708371 - 2709096 | 27996.8 |
| putative transposase orfb | NIG5292_02723 | Not Available | Positive | 2709203 - 2709655 | 17394.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
