Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulatory protein tctd | NIG5292_02467 | Q9HV32 | Negative | 2450443 - 2451111 | 24734.7 |
| tripartite tricarboxylate transporter family receptor | NIG5292_02468 | Not Available | Positive | 2451217 - 2452203 | 33950.2 |
| tripartite tricarboxylate transporter tctb family protein | NIG5292_02469 | Not Available | Positive | 2452284 - 2452766 | 17795.6 |
| tripartite tricarboxylate transporter tcta family protein | NIG5292_02470 | P70795 | Positive | 2452768 - 2454249 | 51258.0 |
| transposase | NIG5292_02471 | Not Available | Positive | 2454852 - 2455139 | 11056.6 |
| hypothetical protein | NIG5292_02472 | Not Available | Positive | 2455728 - 2456090 | 12670.1 |
| multidrug transporter mdta | NIG5292_02473 | Not Available | Positive | 2456602 - 2457648 | 36845.7 |
| cation efflux system protein czca | NIG5292_02474 | P25197 | Positive | 2457658 - 2460711 | 109468.0 |
| endonuclease/exonuclease/phosphatase family protein | NIG5292_02475 | Not Available | Negative | 2461556 - 2462557 | 35955.5 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | NIG5292_02476 | Q28QL7 | Negative | 2462545 - 2463594 | 38030.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
