Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NIG5292_02389 | Not Available | Positive | 2384154 - 2385314 | 42288.9 |
| hypothetical protein | NIG5292_02390 | Not Available | Positive | 2385319 - 2387232 | 69967.2 |
| polysaccharide biosynthesis protein | NIG5292_02391 | Not Available | Positive | 2387226 - 2388695 | 52401.1 |
| o-antigen ligase | NIG5292_02392 | Not Available | Positive | 2388692 - 2389999 | 48113.4 |
| asparagine synthetase | NIG5292_02393 | Q58456 | Positive | 2390001 - 2391890 | 69640.3 |
| heparinase ii/iii-like protein | NIG5292_02394 | Not Available | Positive | 2391872 - 2393662 | 66368.3 |
| d-inositol 3-phosphate glycosyltransferase | NIG5292_02395 | Not Available | Positive | 2393665 - 2394882 | 43932.9 |
| putative sugar transferase epsl | NIG5292_02396 | P71062 | Positive | 2394924 - 2395517 | 22314.3 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-alpha-d-glucosamine n-acetyltransferase | NIG5292_02397 | Q7DBF7 | Positive | 2395514 - 2396140 | 21961.6 |
| putative pyridoxal phosphate-dependent aminotransferase epsn | NIG5292_02398 | Q795J3 | Positive | 2396144 - 2397277 | 41055.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
