Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NIG5292_02308 | Not Available | Negative | 2304938 - 2308225 | 113570.0 |
| autotransporter assembly factor tama | NIG5292_02309 | Not Available | Negative | 2308225 - 2310084 | 65550.0 |
| hypothetical protein | NIG5292_02310 | Not Available | Positive | 2310374 - 2310703 | 11562.8 |
| beta-glucosidase a | NIG5292_02311 | Q08638 | Positive | 2310707 - 2312017 | 48932.4 |
| (s)-mandelate dehydrogenase | NIG5292_02312 | P20932 | Negative | 2311984 - 2313087 | 39937.8 |
| sorbitol dehydrogenase | NIG5292_02313 | P9WQC2 | Negative | 2313084 - 2314082 | 34399.6 |
| sulfopropanediol 3-dehydrogenase | NIG5292_02314 | Q5LVV1 | Negative | 2314153 - 2315460 | 46840.5 |
| transcriptional regulatory protein uhpa | NIG5292_02315 | Not Available | Negative | 2315607 - 2316155 | 20296.6 |
| succinyl-diaminopimelate desuccinylase | NIG5292_02316 | B3R2D1 | Positive | 2316219 - 2317544 | 48438.6 |
| polysaccharide export protein wza | NIG5292_02317 | Q48450 | Positive | 2318492 - 2319901 | 51116.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
