Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transport protein exbd | NIG5292_02288 | P50599 | Negative | 2285973 - 2286455 | 16649.2 |
| biopolymer transport protein exbb | NIG5292_02289 | P50598 | Negative | 2286459 - 2287133 | 24260.2 |
| acyl-coa thioester hydrolase ybgc | NIG5292_02290 | Not Available | Negative | 2287234 - 2287623 | 14818.8 |
| hypothetical protein | NIG5292_02291 | Not Available | Negative | 2287620 - 2288273 | 23587.3 |
| holliday junction atp-dependent dna helicase ruvb | NIG5292_02292 | Q1GE13 | Negative | 2288291 - 2289307 | 37178.9 |
| holliday junction atp-dependent dna helicase ruva | NIG5292_02293 | Q168A3 | Negative | 2289317 - 2289991 | 23121.8 |
| crossover junction endodeoxyribonuclease ruvc | NIG5292_02294 | A3PLU5 | Negative | 2289988 - 2290506 | 17801.0 |
| hypothetical protein | NIG5292_02295 | Not Available | Positive | 2290874 - 2291065 | 6889.23 |
| hypothetical protein | NIG5292_02296 | Not Available | Negative | 2291155 - 2291490 | 12508.2 |
| ribosomal protein l11 methyltransferase | NIG5292_02297 | Q98KD0 | Negative | 2291576 - 2292445 | 30195.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
