Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase assembly protein ctag | NIG5292_02268 | Q5LNX9 | Negative | 2260874 - 2261485 | 22669.9 |
| hypothetical protein | NIG5292_02269 | P08302 | Negative | 2261482 - 2261676 | 6903.33 |
| protoheme ix farnesyltransferase | NIG5292_02270 | A8LHT6 | Negative | 2261676 - 2262620 | 34268.5 |
| cytochrome c oxidase subunit 2 precursor | NIG5292_02271 | Q03736 | Negative | 2262696 - 2263616 | 33550.2 |
| protease tldd | NIG5292_02272 | P0AGG9 | Positive | 2263811 - 2265232 | 49196.5 |
| dna protecting protein dpra | NIG5292_02273 | Q8DPI7 | Positive | 2265336 - 2266559 | 42611.9 |
| dna topoisomerase 1 | NIG5292_02274 | Q9X3X7 | Positive | 2266720 - 2269332 | 96908.2 |
| putative succinyl-coa:3-ketoacid coenzyme a transferase subunit a | NIG5292_02275 | B0RVK4 | Positive | 2269596 - 2270291 | 25055.2 |
| putative succinyl-coa:3-ketoacid coenzyme a transferase subunit b | NIG5292_02276 | B0RVK3 | Positive | 2270293 - 2270916 | 21860.5 |
| pullulanase secretion envelope puld | NIG5292_02277 | Not Available | Positive | 2271433 - 2272674 | 45565.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
