Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NIG5292_01347 | Not Available | Positive | 1338278 - 1339468 | 40830.3 |
| putative pep-cterm system tpr-repeat lipoprotein | NIG5292_01348 | O67178 | Positive | 1339572 - 1341056 | 54797.6 |
| pyridoxal phosphate enzyme, yggs family | NIG5292_01349 | P24562 | Positive | 1341037 - 1341690 | 23487.1 |
| l,d-transpeptidase catalytic domain | NIG5292_01350 | Not Available | Negative | 1341701 - 1342222 | 19749.8 |
| gtp cyclohydrolase-2 | NIG5292_01351 | P43525 | Negative | 1342219 - 1343286 | 38063.8 |
| transcriptional regulatory protein yycf | NIG5292_01352 | P37478 | Positive | 1343436 - 1344122 | 25843.0 |
| pyridoxamine 5'-phosphate oxidase, fmn-binding family | NIG5292_01353 | Not Available | Negative | 1344263 - 1344859 | 21886.2 |
| exodeoxyribonuclease iii | NIG5292_01354 | P0A1B0 | Positive | 1344974 - 1345762 | 29349.7 |
| thioredoxin | NIG5292_01355 | Q9CM49 | Positive | 1345818 - 1346732 | 31817.3 |
| lon protease 2 | NIG5292_01356 | Not Available | Positive | 1346796 - 1347434 | 23968.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
