Nereida ignava

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Nereida

Description

Nereida ignava is a Gram-negative, aerobic bacterium characterized by its rod shape and psychrotolerant nature. This organism has a single replicon and is non-motile, indicating that it does not possess flagella or other structures for movement. N. ignava thrives optimally at a temperature of 16°C, which aligns with its classification as psychrotolerant, allowing it to grow in cooler environments. The ability of N. ignava to tolerate low temperatures is particularly significant in ecological contexts, as it suggests a potential role in nutrient cycling in cold marine ecosystems. Understanding the growth requirements and characteristics of such microorganisms can provide insights into their ecological niches and contributions to the overall health of marine environments. The accession number for N. ignava is CVQV00000000.1, which can be referenced for further genomic information.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusNereida
SpeciesNereida ignava
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nereida ignava genome assembly N.ignavaCECT5292_PROKKA, contig

Gene Summary

Adenine Count

659269 bp

Thymine Count

668898 bp

Guanine Count

785549 bp

Cytosine Count

774604 bp

Genome Length

2888349 bp

Protein-coding Genes

2834 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNIG5292_01258A8LNL0Positive1250409 - 12506729678.89
chromosomal replication initiator protein dnaaNIG5292_01259Q16DK6Positive1251101 - 125245050409.8
dna polymerase iii subunit betaNIG5292_01260P0CAU5Positive1252544 - 125366240436.1
dna replication and repair protein recfNIG5292_01261B9JGW1Positive1253659 - 125475639969.8
putative lactoylglutathione lyaseNIG5292_01262Not AvailablePositive1254773 - 125518914593.0
leucine efflux proteinNIG5292_01263Not AvailablePositive1255186 - 125580622274.1
dna gyrase subunit bNIG5292_01264P0CAX1Positive1255884 - 125829889490.5
cytochrome c-type biogenesis protein ccmeNIG5292_01265Not AvailableNegative1258446 - 125884414936.9
acetate operon repressorNIG5292_01266Not AvailableNegative1258954 - 125971828432.6
alcohol dehydrogenaseNIG5292_01267Q988C9Positive1259839 - 126144659000.4

Displaying genes 1321 – 1330 of 2928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

174 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da

Displaying 1–10 of 174 metabolites

Health Effects

No health effects information available for this bacterium.