Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NIG5292_01108 | Not Available | Positive | 1098725 - 1099594 | 31611.8 |
| ion transport protein | NIG5292_01109 | Not Available | Positive | 1099641 - 1100402 | 28610.8 |
| 1-deoxy-d-xylulose-5-phosphate synthase | NIG5292_01110 | Q5LX42 | Negative | 1100399 - 1102327 | 68153.5 |
| farnesyl diphosphate synthase | NIG5292_01111 | P22939 | Negative | 1102339 - 1103202 | 29682.4 |
| exodeoxyribonuclease 7 small subunit | NIG5292_01112 | Q1GCG2 | Negative | 1103203 - 1103445 | 8463.94 |
| histone deacetylase-like amidohydrolase | NIG5292_01113 | P72702 | Negative | 1103442 - 1104368 | 32594.6 |
| transcriptional regulatory protein ompr | NIG5292_01114 | P31079 | Negative | 1104409 - 1105119 | 26484.2 |
| marr family protein | NIG5292_01115 | P31078 | Negative | 1105119 - 1105622 | 19002.8 |
| branched-chain-amino-acid aminotransferase | NIG5292_01116 | O27481 | Positive | 1105763 - 1106629 | 31811.7 |
| carboxylate/amino acid/amine transporter | NIG5292_01117 | Not Available | Negative | 1106706 - 1107638 | 33336.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
