Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Nereida
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Nereida |
| Species | Nereida ignava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659269 bp
Thymine Count
668898 bp
Guanine Count
785549 bp
Cytosine Count
774604 bp
Genome Length
2888349 bp
Protein-coding Genes
2834 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence protein | NIG5292_01008 | Q8ZM36 | Negative | 1003941 - 1004333 | 14293.9 |
| glycine oxidase | NIG5292_01009 | Not Available | Negative | 1004333 - 1005355 | 36014.9 |
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmc | NIG5292_01010 | A7MH59 | Positive | 1005404 - 1006060 | 24181.3 |
| carboxylate/amino acid/amine transporter | NIG5292_01011 | Q9ZE70 | Positive | 1006057 - 1006929 | 31390.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | NIG5292_01012 | Q5LMK7 | Positive | 1007010 - 1007879 | 30419.6 |
| oxygen-independent coproporphyrinogen-iii oxidase | NIG5292_01013 | Q51676 | Negative | 1007957 - 1009312 | 50399.5 |
| nitrogen fixation regulation protein fixk | NIG5292_01014 | P51007 | Positive | 1009367 - 1010098 | 27089.5 |
| hypothetical protein | NIG5292_01015 | P98059 | Positive | 1010221 - 1011831 | 60145.0 |
| cbb3-type cytochrome c oxidase subunit ii | NIG5292_01016 | Not Available | Positive | 1011844 - 1012569 | 27063.8 |
| cbb3-type cytochrome oxidase, subunit 3 | NIG5292_01017 | Not Available | Positive | 1012586 - 1012822 | 8591.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
