Yersinia kristensenii

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia kristensenii is a rod-shaped bacterium characterized by its presence in various environmental and food sources. This organism exhibits true flagella, which contribute to its motility. Notably, Y. kristensenii has three replicons, indicating a complex genomic organization that may aid in its adaptability to different environments. The bacterium is known to be associated with Homo sapiens as a host, suggesting potential implications for human health. While specific pathogenicity details are not provided, the relationship with humans points to the need for further investigation into its ecological roles and potential effects on human microbiomes. The genomic data for Y. kristensenii can be found in multiple accessions, namely CPYI00000000.1, CQAQ00000000.1, and CQAW00000000.1. These accessions can facilitate further research into the genetic traits and behaviors of the bacterium. In summary, Yersinia kristensenii is a motile, rod-shaped bacterium found in environmental and food habitats, with implications for human association. The presence of three replicons may play a role in its ecological adaptability, highlighting the need for continued research into its biological and ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia kristensenii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia kristensenii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatenvironment; food
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia kristensenii genome assembly 5139_5#5, scaffold

Gene Summary

Adenine Count

1152032 bp

Thymine Count

1127446 bp

Guanine Count

998346 bp

Cytosine Count

1046858 bp

Genome Length

4324694 bp

Protein-coding Genes

3779 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tol-pal system protein ybgfERS008500_00883P45955Negative940940 - 94174928959.7
peptidoglycan-associated outer membrane lipoproteinERS008500_00884P0A913Negative941759 - 94226518160.6
translocation protein tolbERS008500_00885A1JRK8Negative942316 - 94360845862.2
cell envelope integrity inner membrane protein tolaERS008500_00886P19934Negative943728 - 94488840109.1
colicin uptake protein tolrERS008500_00887P0ABV8Negative944985 - 94541315485.0
colicin uptake protein tolqERS008500_00888P0ABV0Negative945426 - 94611225324.8
acyl-coa thioester hydrolase ybgcERS008500_00889P0A8Z5Negative946112 - 94651315330.5
protein ybgeERS008500_00890P0AAV2Negative946662 - 94696111144.0
cyd operon protein ybgtERS008500_00891P56100Negative946936 - 9470734816.71
cytochrome d ubiquinol oxidase subunit iiERS008500_00892P0ABK4Negative947086 - 94822542413.6

Displaying genes 921 – 930 of 12201 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

547 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da

Displaying 1–10 of 547 metabolites

Health Effects

No health effects information available for this bacterium.