Rhizobium ruizarguesonis strain Vaf-46

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium ruizarguesonis strain Vaf-46 is a Gram-negative, rod-shaped bacterium that thrives in soil environments. This strain is classified as a chemoheterotroph, indicating that it derives its energy from organic compounds. It is an aerobic organism, requiring oxygen for its metabolic processes, and is mesophilic, growing optimally within moderate temperature ranges. Mobility is a characteristic feature of R. ruizarguesonis strain Vaf-46, which possesses flagella that facilitate its movement through the soil. This motility may enhance its ability to colonize plant roots and engage in symbiotic relationships. Notably, this strain does not undergo sporulation, which suggests it relies on its ability to adapt to environmental conditions rather than forming dormant spores for survival. The strain has two replicons, indicating the presence of multiple genetic elements, which may contribute to its adaptability and metabolic versatility. Its accessions, CP171851.1 and CP171853.1, provide further genetic information crucial for understanding its biology. In an ecological context, the ability of R. ruizarguesonis strain Vaf-46 to engage in symbiosis with leguminous plants can enhance soil fertility through nitrogen fixation, thus playing a significant role in nutrient cycling within its habitat. This interaction underlines the importance of soil-dwelling bacteria in supporting plant growth and maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium ruizarguesonis
Strainstrain Vaf-46

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium ruizarguesonis strain Vaf-46
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Rhizobium ruizarguesonis strain Vaf-46 plasmid unnamed5.

Gene Summary

Adenine Count

41265 bp

Thymine Count

41638 bp

Guanine Count

58734 bp

Cytosine Count

58376 bp

Genome Length

200013 bp

Protein-coding Genes

203 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dead/deah box helicaseA4U53_011160Not AvailableNegative509876 - 51104143622.7
dead/deah box helicaseA4U53_011165Not AvailablePositive511199 - 51233340393.3
dead/deah box helicaseA4U53_011170Not AvailablePositive512352 - 51348040528.4
dead/deah box helicaseA4U53_011175Not AvailableNegative513586 - 5138048205.05
l,d-transpeptidase family proteinA4U53_011180Not AvailableNegative513810 - 51503044560.2
acetyl-coa carboxylase carboxyltransferase subunit alphaA4U53_011185Not AvailableNegative515227 - 51618034537.3
dead/deah box helicaseA4U53_011190Not AvailableNegative516243 - 51719733621.8
hypothetical proteinA4U53_011195Not AvailableNegative517203 - 5173796364.9
dead/deah box helicaseA4U53_011200Not AvailablePositive517528 - 51811921544.7
3-dehydroquinate synthaseA4U53_011205Not AvailablePositive518116 - 51924640011.1

Displaying genes 961 – 970 of 5473 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.